Shrabanti Chowdhury, PhD
img_Shrabanti Chowdhury
ASSISTANT PROFESSOR | Genetics and Genomic Sciences
Research Topics
Bioinformatics, Biostatistics, Cancer, Computational Biology, Genomics, Proteomics, Systems Biology
Multi-Disciplinary Training Area
Cancer Biology [CAB], Genetics and Genomic Sciences [GGS]

BSc, St. Xavier's College, Kolkata, WB, India

MSc, Indian Institute of Technology Kanpur, UP, India

PhD, University of California Riverside, CA, USA

2023

Outstanding Trainee Paper Award.

GGS Department, Icahn School of Medicine at Mount Sinai.

2020

Featured in the Junior investigator spotlight series of CPTAC program.

National Cancer Institute.

2016

Patient Centered Outcome Research Institute Trainee Scholarship Award.

PCORI

2015

D.V. Gokhale International Travel Grant.

2011

Dean's Distinguished Fellowship Award.

University Of California, Riverside.

2011

Sangheeta Pradhan Memorial Award.

Indian Institute of Technology Kanpur.

2010

N. Balakrishnan Award and Academic excellence Award.

Indian Institute of Technology Kanpur.

Publications

Selected Publications

Proteomic-based stemness score measures oncogenic dedifferentiation and enables the identification of druggable targets. Iga Kołodziejczak-Guglas, Renan L.S. Simões, Emerson de Souza Santos, Elizabeth G. Demicco, Rossana N. Lazcano Segura, Weiping Ma, Pei Wang, Yifat Geffen, Erik Storrs, Francesca Petralia, Antonio Colaprico, Felipe da Veiga Leprevost, Pietro Pugliese, Michele Ceccarelli, Houtan Noushmehr, Alexey I. Nesvizhskii, Bożena Kamińska, Waldemar Priebe, Jan Lubiński, Bing Zhang, Alexander J. Lazar, Paweł Kurzawa, Mehdi Mesri, Ana I. Robles, Alicia Francis, Amanda G. Paulovich, Anna P. Calinawan, Antonio Iavarone, Arul M. Chinnaiyan, Bo Wen, Boris Reva, Brian J. Druker, Caleb M. Lindgren, Chandan Kumar-Sinha, Chelsea J. Newton, Chen Huang, Chet Birger, Corbin Day, D. R. Mani, Daniel Cui Zhou, Daniel W. Chan, David Fenyö, David I. Heiman, Dmitry Rykunov, Emily Huntsman, Eric E. Schadt, Eric J. Jaehnig, Shrabanti Chowdhury, Xiaoyu Song, Zeynep H. Gümüş. Cell Genomics

Precision proteogenomics reveals pan-cancer impact of germline variants. Fernanda Martins Rodrigues, Nadezhda V. Terekhanova, Kathleen J. Imbach, Karl R. Clauser, Myvizhi Esai Selvan, Isabel Mendizabal, Yifat Geffen, Yo Akiyama, Myranda Maynard, Tomer M. Yaron, Yize Li, Song Cao, Erik P. Storrs, Olivia S. Gonda, Adrian Gaite-Reguero, Akshay Govindan, Emily A. Kawaler, Matthew A. Wyczalkowski, Robert J. Klein, Berk Turhan, Karsten Krug, D. R. Mani, Felipe da Veiga Leprevost, Alexey I. Nesvizhskii, Steven A. Carr, David Fenyö, Michael A. Gillette, Antonio Colaprico, Antonio Iavarone, Ana I. Robles, Kuan lin Huang, Chandan Kumar-Sinha, François Aguet, Alexander J. Lazar, Lewis C. Cantley, Urko M. Marigorta, Zeynep H. Gümüş, Matthew H. Bailey, Gad Getz, Eduard Porta-Pardo, Li Ding, Eunkyung An, Meenakshi Anurag, Jasmin Bavarva, Shrabanti Chowdhury, Francesca Petralia, Boris Reva, Eric E. Schadt, Xiaoyu Song, Pei Wang. Cell

Learning directed acyclic graphs for ligands and receptors based on spatially resolved transcriptomic data of ovarian cancer. Shrabanti Chowdhury, Sammy Ferri-Borgogno, Peng Yang, Wenyi Wang, Jie Peng, Samuel C. Mok, Pei Wang. Briefings in Bioinformatics

View All Publications

Physicians and scientists on the faculty of the Icahn School of Medicine at Mount Sinai often interact with pharmaceutical, device, biotechnology companies, and other outside entities to improve patient care, develop new therapies and achieve scientific breakthroughs. In order to promote an ethical and transparent environment for conducting research, providing clinical care and teaching, Mount Sinai requires that salaried faculty inform the School of their outside financial relationships.

Dr. Chowdhury has not yet completed reporting of Industry relationships.

Mount Sinai's faculty policies relating to faculty collaboration with industry are posted on our website. Patients may wish to ask their physician about the activities they perform for companies.