Honoratus Van Bakel, PhD
img_Honoratus Van Bakel
ASSOCIATE PROFESSOR | Genetics and Genomic Sciences
ASSOCIATE PROFESSOR | Microbiology
ASSOCIATE PROFESSOR | Artificial Intelligence and Human Health
Research Topics
Antimicrobial Resistance, Bacterial Genetics, Bioinformatics, Coronavirus, Gene Regulation, Genomics, Infectious Disease, Influenza Virus, RNA, RNA Splicing & Processing, SARS Virus, Sequence Alignment, Staphylococcus Aureus, Stem Cells, Virulence Genes, Viruses and Virology
Multi-Disciplinary Training Area
Genetics and Genomic Sciences [GGS], Microbiology [MIC]
A complete overview of the work in the lab can be found on the van Bakel Lab website.

MS, University of Utrecht

PhD, University of Utrecht

Publications

Selected Publications

Cross-species and mammal-to-mammal transmission of clade 2.3.4.4b highly pathogenic avian influenza A/H5N1 with PB2 adaptations. Catalina Pardo-Roa, Martha I. Nelson, Naomi Ariyama, Carolina Aguayo, Leonardo I. Almonacid, Ana S. Gonzalez-Reiche, Gabriela Muñoz, Mauricio Ulloa, Claudia Ávila, Carlos Navarro, Rodolfo Reyes, Pablo N. Castillo-Torres, Christian Mathieu, Ricardo Vergara, Álvaro González, Carmen Gloria González, Hugo Araya, Andrés Castillo, Juan Carlos Torres, Paulo Covarrubias, Patricia Bustos, Harm van Bakel, Jorge Fernández, Rodrigo A. Fasce, Magdalena Johow, Víctor Neira, Rafael A. Medina. Nature Communications

Host-microbe multiomic profiling identifies distinct COVID-19 immune dysregulation in solid organ transplant recipients. Harry Pickering, Joanna Schaenman, Hoang Van Phan, Cole Maguire, Alexandra Tsitsiklis, Nadine Rouphael, Nelson Iván Agudelo Higuita, Mark A. Atkinson, Scott Brakenridge, Monica Fung, William Messer, Vicki Seyfert-Margolis, Adeeb Rahman, Kari Wong, Greg Michelotti, Scott R. Hutton, James A. Overton, Crystal Nagle, Judie Sheidy, Pam Schearer, Kristen Ulring, Nathan Mege, Brandon Rogowski, George P. Tegos, Renee McLin, Sara Furukawa, Mathew R. Bell, Nicholas C. Semenza, Brett Croen, Mark Martens, Cecilia M. Smith, Brent Simmons, I. Michael Goonewardene, Kai Nie, Manishkumar Patel, Hui Xie, Daniel Stadlbauer, Giulio Kleiner, Erna Kojic, Deena Altman, Miti Saksena, Lubbertus C.F. Mulder, Geoffrey Kelly, Brian Lee, Jingjing Qi, Ana Silvia Gonzalez-Reiche, Harm Van Bakel, Viviana Simon, Seunghee Kim-Schulze, Florian Krammer. Nature Communications

The Global Influenza Hospital Surveillance Network: A Multicountry Public Health Collaboration. Marta C Nunes, Cecile Chauvel, Sonia M Raboni, F.  Xavier López-Labrador, Melissa K Andrew, Nazish Badar, Vicky Baillie, Antonin Bal, Kedar Baral, Elsa Baumeister, Celina Boutros, Elena Burtseva, Daouda Coulibaly, Ben Cowling, Daria Danilenko, Ghassan Dbaibo, Gregory Destras, Ndongo Dia, Anca Cristina Drăgănescu, Heloisa I  G Giamberardino, Doris Gomez-Camargo, Laurence Josset, Parvaiz A Koul, Jan Kyncl, Victor Alberto Laguna-Torres, Odile Launay, Liem Binh Luong Nugyen, Shelly McNeil, Snežana Medić, Ainara Mira-Iglesias, Alla Mironenko, Aneta Nitsch-Osuch, Alejandro Orrico-Sánchez, Nancy A Otieno, Hadrien Regue, Guillermo M Ruiz-Palacios, Afif Ben Salah, Muhammad Salman, Oana Săndulescu, Viviana Simon, Anna Sominina, Emilia Sordillo, Mine Durusu Tanriover, Serhat Unal, Harm van Bakel, Philippe Vanhems, Tao Zhang, Catherine Commaille-Chapus, Camille Hunsinger, Joseph Bresee, Bruno Lina, John W McCauley, Justin R Ortiz, Cecile Viboud, Wenqing Zhang, Laurence Torcel-Pagnon, Cedric Mahe, Sandra S Chaves. Influenza and other Respiratory Viruses

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Mount Sinai's Pathogen Surveillance Program

Physicians and scientists on the faculty of the Icahn School of Medicine at Mount Sinai often interact with pharmaceutical, device, biotechnology companies, and other outside entities to improve patient care, develop new therapies and achieve scientific breakthroughs. In order to promote an ethical and transparent environment for conducting research, providing clinical care and teaching, Mount Sinai requires that salaried faculty inform the School of their outside financial relationships.

Dr. Van Bakel has not yet completed reporting of Industry relationships.

Mount Sinai's faculty policies relating to faculty collaboration with industry are posted on our website. Patients may wish to ask their physician about the activities they perform for companies.