Honoratus Van Bakel, PhD
img_Honoratus Van Bakel
ASSOCIATE PROFESSOR | Genetics and Genomic Sciences
ASSOCIATE PROFESSOR | Microbiology
ASSOCIATE PROFESSOR | Artificial Intelligence and Human Health
Research Topics
Antimicrobial Resistance, Bacterial Genetics, Bioinformatics, Coronavirus, Gene Regulation, Genomics, Infectious Disease, Influenza Virus, RNA, RNA Splicing & Processing, SARS Virus, Sequence Alignment, Staphylococcus Aureus, Stem Cells, Virulence Genes, Viruses and Virology
Multi-Disciplinary Training Area
Genetics and Genomic Sciences [GGS], Microbiology [MIC]
A complete overview of the work in the lab can be found on the van Bakel Lab website.

MS, University of Utrecht

PhD, University of Utrecht

Publications

Selected Publications

Machine learning models predict long COVID outcomes based on baseline clinical and immunologic factors. Naresh Doni Jayavelu, Hady Samaha, Sonia Tandon Wimalasena, Annmarie Hoch, Jeremy P. Gygi, Gisela Gabernet, Al Ozonoff, Shanshan Liu, Carly E. Milliren, Ofer Levy, Lindsey R. Baden, Esther Melamed, Lauren I.R. Ehrlich, Grace A. McComsey, Rafick P. Sekaly, Charles B. Cairns, Elias K. Haddad, Joanna Schaenman, Albert C. Shaw, David A. Hafler, Ruth R. Montgomery, David B. Corry, Farrah Kheradmand, Mark A. Atkinson, Scott C. Brakenridge, Nelson I. Agudelo Higuit, Jordan P. Metcalf, Catherine L. Hough, William B. Messer, Bali Pulendran, Kari C. Nadeau, Viviana Simon, Florian Krammer, Monica Kraft, Adeeb Rahman, Kai Nie, Manishkumar Patel, Hui Xie, Daniel Stadlbauer, Giulio Kleiner, Erna Kojic, Deena Altman, Miti Saksena, Lubbertus C.F. Mulder, Geoffrey Kelly, Brian Lee, Jingjing Qi, Ana Silvia Gonzalez-Reiche, Seunghee Kim-Schulze, Harm Van Bakel. Communications Medicine

Antibody responses to SARS-CoV-2 variants LP.8.1, LF.7.1, NB.1.8.1, XFG, and BA.3.2 following KP.2 monovalent mRNA vaccination. Anass Abbad, Brian Lerman, Jordan Ehrenhaus, Brian Monahan, Gagandeep Singh, Adria Wilson, Stefan Slamanig, Ashley Aracena, Neko Lyttle, Jessica R. Nardulli, Keith Farrugia, Zain Khalil, Ana Silvia Gonzalez-Reiche, Mia Emilia Sordillo, Weina Sun, Harm van Bakel, Viviana Simon, Florian Krammer. mBio

Association of influenza viral genetic information with severity markers in patients hospitalised with influenza: multicentre retrospective cohort study. Aung Pone Myint, George Shirreff, Vicky Baillie, Antonin Bal, Celina F. Boutros, Elena Burtseva, Daouda Coulibaly, Daria Danilenko, Ghassan Dbaibo, Gregory Destras, Ndongo Dia, Anca Cristina Drăgănescu, Heloisa I.G. Giamberardino, Andrey B. Komissarov, Parvaiz A. Koul, Victor Alberto Laguna-Torres, Jason J. LeBlanc, Ainara Mira-Iglesias, Alla Mironenko, Alejandro Orrico-Sánchez, Nancy A. Otieno, Oana Săndulescu, Viviana Simon, Anna Sominina, Emilia Sordillo, Mine Durusu Tanriover, Nataliia Teteriuk, Serhat Unal, Harm Van Bakel, Melissa K. Andrew, Joseph Bresee, Bruno Lina, F. Xavier López-Labrador, Justin R. Ortiz, Sonia M. Raboni, Wenqing Zhang, Sandra S. Chaves, Giacomo Cacciapaglia, Laurence Josset, Cécile Chauvel, Marta C. Nunes. BMJ Open

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Mount Sinai's Pathogen Surveillance Program

Physicians and scientists on the faculty of the Icahn School of Medicine at Mount Sinai often interact with pharmaceutical, device, biotechnology companies, and other outside entities to improve patient care, develop new therapies and achieve scientific breakthroughs. In order to promote an ethical and transparent environment for conducting research, providing clinical care and teaching, Mount Sinai requires that salaried faculty inform the School of their outside financial relationships.

Dr. Van Bakel has not yet completed reporting of Industry relationships.

Mount Sinai's faculty policies relating to faculty collaboration with industry are posted on our website. Patients may wish to ask their physician about the activities they perform for companies.