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Honoratus Van Bakel, PhD

img_Honoratus Van Bakel
ASSOCIATE PROFESSOR | Genetics and Genomic Sciences
ASSOCIATE PROFESSOR | Artificial Intelligence and Human Health
ASSOCIATE PROFESSOR | Microbiology
212-824-8945
email
Research Topics
Antimicrobial Resistance, Bacterial Genetics, Bioinformatics, Coronavirus, Gene Regulation, Genomics, Infectious Disease, Influenza Virus, RNA, RNA Splicing & Processing, SARS Virus, Sequence Alignment, Staphylococcus Aureus, Stem Cells, Virulence Genes, Viruses and Virology
Multi-Disciplinary Training Area
Genetics and Genomic Sciences [GGS], Microbiology [MIC]
A complete overview of the work in the lab can be found on the van Bakel Lab website.

MS, University of Utrecht

PhD, University of Utrecht

211
Publications

Selected Publications

Author Correction: Machine learning models predict long COVID outcomes based on baseline clinical and immunologic factors (Communications Medicine, (2026), 6, 1, (1), 10.1038/s43856-025-01230-w). Naresh Doni Jayavelu, Hady Samaha, Sonia Tandon Wimalasena, Annmarie Hoch, Jeremy P. Gygi, Gisela Gabernet, Al Ozonoff, Shanshan Liu, Carly E. Milliren, Ofer Levy, Lindsey R. Baden, Esther Melamed, Lauren I.R. Ehrlich, Grace A. McComsey, Rafick P. Sekaly, Charles B. Cairns, Elias K. Haddad, Joanna Schaenman, Albert C. Shaw, David A. Hafler, Ruth R. Montgomery, David B. Corry, Farrah Kheradmand, Mark A. Atkinson, Scott C. Brakenridge, Nelson I. Agudelo Higuit, Jordan P. Metcalf, Catherine L. Hough, William B. Messer, Bali Pulendran, Kari C. Nadeau, Viviana Simon, Florian Krammer, Monica Kraft, Adeeb Rahman, Kai Nie, Manishkumar Patel, Hui Xie, Daniel Stadlbauer, Giulio Kleiner, Erna Kojic, Deena Altman, Miti Saksena, Lubbertus C.F. Mulder, Geoffrey Kelly, Brian Lee, Jingjing Qi, Ana Silvia Gonzalez-Reiche, Seunghee Kim-Schulze, Harm Van Bakel. Communications Medicine

Machine learning models predict long COVID outcomes based on baseline clinical and immunologic factors. Naresh Doni Jayavelu, Hady Samaha, Sonia Tandon Wimalasena, Annmarie Hoch, Jeremy P. Gygi, Gisela Gabernet, Al Ozonoff, Shanshan Liu, Carly E. Milliren, Ofer Levy, Lindsey R. Baden, Esther Melamed, Lauren I.R. Ehrlich, Grace A. McComsey, Rafick P. Sekaly, Charles B. Cairns, Elias K. Haddad, Joanna Schaenman, Albert C. Shaw, David A. Hafler, Ruth R. Montgomery, David B. Corry, Farrah Kheradmand, Mark A. Atkinson, Scott C. Brakenridge, Nelson I. Agudelo Higuit, Jordan P. Metcalf, Catherine L. Hough, William B. Messer, Bali Pulendran, Kari C. Nadeau, Viviana Simon, Florian Krammer, Monica Kraft, Adeeb Rahman, Kai Nie, Manishkumar Patel, Hui Xie, Daniel Stadlbauer, Giulio Kleiner, Erna Kojic, Deena Altman, Miti Saksena, Lubbertus C.F. Mulder, Geoffrey Kelly, Brian Lee, Jingjing Qi, Ana Silvia Gonzalez-Reiche, Seunghee Kim-Schulze, Harm Van Bakel. Communications Medicine

Seasonal vaccine-induced immunity shows preserved cross-reactivity to H3N2 subclade K in adults. Adria Wilson, Brian Lerman, Reima Ramsamooj, Jacob Mischka, Jordan Ehrenhaus, Ashley Aracena, Yusuf Figueroa, Keith Farrugia, Ana S. Gonzalez-Reiche, Jessica Nardulli, Zain Khalil, Charles Gleason, Eniko Hermann, Komal Srivastava, Emilia Mia Sordillo, Harm van Bakel, Anass Abbad, Florian Krammer, Viviana Simon. eBioMedicine

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Physicians and scientists on the faculty of the Icahn School of Medicine at Mount Sinai often interact with pharmaceutical, device, biotechnology companies, and other outside entities to improve patient care, develop new therapies and achieve scientific breakthroughs. In order to promote an ethical and transparent environment for conducting research, providing clinical care and teaching, Mount Sinai requires that salaried faculty inform the School of their outside financial relationships.

Dr. Van Bakel has not yet completed reporting of industry relationships or has no industry relationships to report.

Mount Sinai's faculty policies relating to faculty collaboration with industry are posted on our website. Patients may wish to ask their physician about the activities they perform for companies.